Environment and Public Health - Microbiota PubMed MeSh Term

Overview

subject area of

• Heliconius Butterflies Host Characteristic and Phylogenetically Structured Adult-Stage Microbiomes  Journal Article
• A Global Survey of Mycobacterial Diversity in Soil  Journal Article
• A Metagenomic Investigation of Spatial and Temporal Changes in Sewage Microbiomes across a University Campus  Journal Article
• A communal catalogue reveals Earth's multiscale microbial diversity  Journal Article
• A dynamic microbial sulfur cycle in a serpentinizing continental ophiolite  Journal Article
• A global metagenomic map of urban microbiomes and antimicrobial resistance  Journal Article
• A microbial clock provides an accurate estimate of the postmortem interval in a mouse model system  Journal Article
• A phylogenetic model for the recruitment of species into microbial communities and application to studies of the human microbiome  Journal Article
• Advancing Our Understanding of the Human Microbiome Using QIIME  Journal Article
• Altered Microbiome Leads to Significant Phenotypic and Transcriptomic Differences in a Lipid Accumulating Chlorophyte  Journal Article
• An altered intestinal mucosal microbiome in HIV-1 infection is associated with mucosal and systemic immune activation and endotoxemia  Journal Article
• An empirically derived method for measuring human gut microbiome alpha diversity: Demonstrated utility in predicting health-related outcomes among a human clinical sample  Journal Article
• An oligotrophic deep-subsurface community dependent on syntrophy is dominated by sulfur-driven autotrophic denitrifiers  Journal Article
• Assessment of Airway Microbiota and Inflammation in Cystic Fibrosis Using Multiple Sampling Methods  Journal Article
• Association between the oral microbiome and brain resting state connectivity in smokers  Journal Article
• Bacterial Biofilm Thickness and Fungal Inhibitory Bacterial Richness Both Prevent Establishment of the Amphibian Fungal Pathogen Batrachochytrium dendrobatidis  Journal Article
• Bacterial and archaeal lipids trace chemo(auto)trophy along the redoxcline in Vancouver Island fjords  Journal Article
• Bidirectional gut-microbial mediated-brain signaling: A new player in stress physiology? (Commentary on O'Mahoney et al., 2019)  Journal Article
• Can we manipulate the soil microbiome to promote carbon sequestration in croplands?  Journal Article
• Captivity, Reintroductions, and the Rewilding of Amphibian-associated Bacterial Communities  Journal Article
• Carbonate facies-specific stable isotope data record climate, hydrology, and microbial communities in Great Salt Lake, UT  Journal Article
• Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment  Journal Article
• Causes and consequences of differences in soil and seed microbiomes for two alpine plants  Journal Article
• Characterization of the public transit air microbiome and resistome reveals geographical specificity  Journal Article
• Chronic stress and captivity alter the cloacal microbiome of a wild songbird  Journal Article
• Cohabiting family members share microbiota with one another and with their dogs  Journal Article
• Community richness of amphibian skin bacteria correlates with bioclimate at the global scale  Journal Article
• Comparison of Standard Culture-Based Method to Culture-Independent Method for Evaluation of Hygiene Effects on the Hand Microbiome  Journal Article
• Consistent changes in the taxonomic structure and functional attributes of bacterial communities during primary succession  Journal Article
• Consistent spatial patterns in microbial taxa of red squirrel gut microbiomes  Journal Article
• Convergence of gut microbiomes in myrmecophagous mammals  Journal Article
• Cross-biome patterns in soil microbial respiration predictable from evolutionary theory on thermal adaptation  Journal Article
• Dietary Nitrate and Nitric Oxide Metabolism: Mouth, Circulation, Skeletal Muscle, and Exercise Performance  Journal Article
• Diversity decoupled from sulfur isotope fractionation in a sulfate-reducing microbial community  Journal Article
• Diversity of gut microbiome in Rocky Mountainsnail across its native range  Journal Article
• Diversity patterns of microbial eukaryotes mirror those of bacteria in Antarctic cryoconite holes  Journal Article
• Do plant-soil interactions influence how the microbial community responds to environmental change?  Journal Article
• Dynamic trophic shifts in bacterial and eukaryotic communities during the first 30 years of microbial succession following retreat of an Antarctic glacier  Journal Article
• Early-life exercise may promote lasting brain and metabolic health through gut bacterial metabolites  Journal Article
• Ecological Correlates of Large-Scale Turnover in the Dominant Members of Pseudacris crucifer Skin Bacterial Communities  Journal Article
• Effects of Spatial Variability and Relic DNA Removal on the Detection of Temporal Dynamics in Soil Microbial Communities  Journal Article
• Effects of Vaccination with 10-Valent Pneumococcal Non-Typeable Haemophilus influenza Protein D Conjugate Vaccine (PHiD-CV) on the Nasopharyngeal Microbiome of Kenyan Toddlers  Journal Article
• Elevational Constraints on the Composition and Genomic Attributes of Microbial Communities in Antarctic Soils  Journal Article
• Embracing the unknown: disentangling the complexities of the soil microbiome  Journal Article
• Esophageal Microbiome in Eosinophilic Esophagitis  Journal Article
• Explicet: graphical user interface software for metadata-driven management, analysis and visualization of microbiome data  Journal Article
• Exploring Service Dogs for Rehabilitation of Veteran With PTSD: A Microbiome Perspective  Journal Article
• Extracellular Metabolism Sets the Table for Microbial Cross-Feeding  Journal Article
• Feasibility of collection and analysis of microbiome data in a longitudinal randomized trial of community gardening  Journal Article
• Fecal Microbiomes of Non-Human Primates in Western Uganda Reveal Species-Specific Communities Largely Resistant to Habitat Perturbation  Journal Article
• Finding intestinal fortitude: Integrating the microbiome into a holistic view of depression mechanisms, treatment, and resilience  Journal Article
• Functional redundancy in local spatial scale microbial communities suggests stochastic processes at an urban wilderness preserve in Austin, TX, USA  Journal Article
• Genetic influences on the human oral microbiome  Journal Article
• Global Patterns and Climatic Controls of Dust-Associated Microbial Communities  Journal Article
• Glucocorticoids coordinate changes in gut microbiome composition in wild North American red squirrels  Journal Article
• Gut microbiome composition and metabolomic profiles of wild western lowland gorillas (Gorilla gorilla gorilla) reflect host ecology  Journal Article
• Gut microbiome of century-old snail specimens stable across time in preservation  Journal Article
• Habitat degradation impacts black howler monkey (Alouatta pigra) gastrointestinal microbiomes  Journal Article
• Host identity is the dominant factor in the assembly of nematode and tardigrade gut microbiomes in Antarctic Dry Valley streams  Journal Article
• Human microbiome transfer in the built environment differs based on occupants, objects, and buildings  Journal Article
• Hygiene and other early childhood influences on the subsequent function of the immune system  Journal Article
• Identifying fungal-host associations in an amphibian host system  Journal Article
• Impacts of Plant-Based Foods in Ancestral Hominin Diets on the Metabolism and Function of Gut Microbiota In Vitro  Journal Article
• Inhibitory bacteria reduce fungi on early life stages of endangered Colorado boreal toads (Anaxyrus boreas)  Journal Article
• Interpretable metric learning in comparative metagenomics: The adaptive Haar-like distance  Journal Article
• Investigation of bacterial repopulation after sinus surgery and perioperative antibiotics  Journal Article
• Lambda Interferon Restructures the Nasal Microbiome and Increases Susceptibility to Staphylococcus aureus Superinfection  Journal Article
• Large Comparative Analyses of Primate Body Site Microbiomes Indicate that the Oral Microbiome Is Unique among All Body Sites and Conserved among Nonhuman Primates  Journal Article
• Leaf side determines the relative importance of dispersal versus host filtering in the phyllosphere microbiome  Journal Article
• Learning representations of microbe-metabolite interactions.  Journal Article
• Linking bacterial community composition to soil salinity along environmental gradients  Journal Article
• Longitudinal homogenization of the microbiome between both occupants and the built environment in a cohort of United States Air Force Cadets  Journal Article
• Metagenome sequence of Elaphomyces granulatus from sporocarp tissue reveals Ascomycota ectomycorrhizal fingerprints of genome expansion and a Proteobacteria-rich microbiome  Journal Article
• Metamorphosis of a Butterfly-Associated Bacterial Community  Journal Article
• Microbial "old friends', immunoregulation and socioeconomic status  Journal Article
• Microbial Communities of High-Elevation Fumaroles, Penitentes, and Dry Tephra "Soils" of the Puna de Atacama Volcanic Zone  Journal Article
• Microbial community shifts in streams receiving treated wastewater effluent  Journal Article
• Microbial diversity of an Antarctic subglacial community and high-resolution replicate sampling inform hydrological connectivity in a polar desert  Journal Article
• Microbial drivers of methane emissions from unrestored industrial salt ponds.  Journal Article
• Microbial residence time is a controlling parameter of the taxonomic composition and functional profile of microbial communities  Journal Article
• Microbial terroir: associations between soil microbiomes and the flavor chemistry of mustard (Brassica juncea)  Journal Article
• Microbiome analyses of blood and tissues suggest cancer diagnostic approach  Journal Article
• Microbiome of Affected and Unaffected Skin of Patients With Atopic Dermatitis Before and After Emollient Treatment  Journal Article
• Microbiota, Immunoregulatory Old Friends and Psychiatric Disorders  Journal Article
• Military-Related Exposures, Social Determinants of Health, and Dysbiosis: The United States-Veteran Microbiome Project (US-VMP)  Journal Article
• Multiomic Analyses of Nascent Preterm Infant Microbiomes Differentiation Suggest Opportunities for Targeted Intervention  Journal Article
• Niche and metabolic principles explain patterns of diversity and distribution: theory and a case study with soil bacterial communities  Journal Article
• Nine (not so simple) steps: a practical guide to using machine learning in microbial ecology  Journal Article
• Nitrogen Enrichment during Soil Organic Matter Burning and Molecular Evidence of Maillard Reactions  Journal Article
• Non-lithifying microbial ecosystem dissolves peritidal lime sand  Journal Article
• Novel bacterial lineages associated with boreal moss species  Journal Article
• Novosphingobium and Its Potential Role in Chronic Obstructive Pulmonary Diseases: Insights from Microbiome Studies  Journal Article
• Nutrient Addition Dramatically Accelerates Microbial Community Succession  Journal Article
• Of poisons and parasites-the defensive role of tetrodotoxin against infections in newts  Journal Article
• Palaeoclimate explains a unique proportion of the global variation in soil bacterial communities  Journal Article
• Partial restoration of the microbiota of cesarean-born infants via vaginal microbial transfer  Journal Article
• Predicting fungal infection rate and severity with skin-associated microbial communities on amphibians  Journal Article
• Predicting the responsiveness of soil biodiversity to deforestation: a cross-biome study  Journal Article
• Primary to post-depositional microbial controls on the stable and clumped isotope record of shoreline sediments at Fayetteville Green Lake.  Journal Article
• Primate vaginal microbiomes exhibit species specificity without universal Lactobacillus dominance  Journal Article
• Probiotic treatment restores protection against lethal fungal infection lost during amphibian captivity  Journal Article
• Purifying the Impure: Sequencing Metagenomes and Metatranscriptomes from Complex Animal-associated Samples  Journal Article
• Quantifying human impact on Earth's microbiome  Journal Article
• Refining the Application of Microbial Lipids as Tracers of Staphylococcus aureus Growth Rates in Cystic Fibrosis Sputum  Journal Article
• Relating Metatranscriptomic Profiles to the Micropollutant Biotransformation Potential of Complex Microbial Communities  Journal Article
• Relating belowground microbial composition to the taxonomic, phylogenetic, and functional trait distributions of trees in a tropical forest  Journal Article
• Relationship between dissolved organic matter quality and microbial community composition across polar glacial environments  Journal Article
• Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.  Journal Article
• Review of human hand microbiome research  Journal Article
• Single-Stranded DNA Viruses in Antarctic Cryoconite Holes  Journal Article
• Sinus culture poorly predicts resident microbiota  Journal Article
• Sinus microbiota varies among chronic rhinosinusitis phenotypes and predicts surgical outcome  Journal Article
• Spatial autocorrelation of microbial communities atop a debris-covered glacier is evidence of a supraglacial chronosequence  Journal Article
• Spatial patterning of soil microbial communities created by fungus-farming termites  Journal Article
• Spatio-temporal dynamics of soil bacterial communities as a function of Amazon forest phenology  Journal Article
• Specific Microbiome Changes in a Mouse Model of Parenteral Nutrition Associated Liver Injury and Intestinal Inflammation  Journal Article
• Statistical Learning and Uncommon Soil Microbiota Explain Biogeochemical Responses after Wildfire  Journal Article
• Strong Dispersal Limitation of Microbial Communities at Shackleton Glacier, Antarctica  Journal Article
• Structure of bacterial and eukaryote communities reflect in situ controls on community assembly in a high-alpine lake  Journal Article
• Succession of toxicity and microbiota in hydraulic fracturing flowback and produced water in the Denver-Julesburg Basin  Journal Article
• Sulfur cycling at natural hydrocarbon and sulfur seeps in Santa Paula Creek, CA  Journal Article
• Tales from the tomb: the microbial ecology of exposed rock surfaces  Journal Article
• Temporal variability is a personalized feature of the human microbiome  Journal Article
• The Sphagnum microbiome: new insights from an ancient plant lineage  Journal Article
• The Bee Microbiome: Impact on Bee Health and Model for Evolution and Ecology of Host-Microbe Interactions  Journal Article
• The Effect of PPI Use on Human Gut Microbiota and Weight Loss in Patients Undergoing Laparoscopic Roux-en-Y Gastric Bypass  Journal Article
• The Effects of Airway Microbiome on Corticosteroid Responsiveness in Asthma  Journal Article
• The Future of Environmental DNA in Forensic Science  Journal Article
• The Gut Microbiota Appears to Compensate for Seasonal Diet Variation in the Wild Black Howler Monkey (Alouatta pigra)  Journal Article
• The Microbiome of the Built Environment and Human Behavior: Implications for Emotional Health and Well-Being in Postmodern Western Societies  Journal Article
• The Microbiome of the Middle Meatus in Healthy Adults  Journal Article
• The Microbiota, Immunoregulation, and Mental Health: Implications for Public Health.  Journal Article
• The Primate Vaginal Microbiome: Comparative Context and Implications for Human Health and Disease  Journal Article
• The Rhizosphere Responds: Rich Fen Peat and Root Microbial Ecology after Long-Term Water Table Manipulation  Journal Article
• The Role of Gut Microbes in Satisfying the Nutritional Demands of Adult and Juvenile Wild, Black Howler Monkeys (Alouatta pigra)  Journal Article
• The Treatment-Naive Microbiome in New-Onset Crohn's Disease  Journal Article
• The amphibian skin-associated microbiome across species, space and life history stages  Journal Article
• The disappearing periglacial ecosystem atop Mt. Kilimanjaro supports both cosmopolitan and endemic microbial communities  Journal Article
• The diversity and function of sourdough starter microbiomes  Journal Article
• The global-scale distributions of soil protists and their contributions to belowground systems  Journal Article
• The gut microbiota response to helminth infection depends on host sex and genotype  Journal Article
• The influence of soil age on ecosystem structure and function across biomes  Journal Article
• The interplay between microbial communities and soil properties  Journal Article
• The microbiome of the built environment and mental health  Conference Proceeding
• Tracking down the sources of experimental contamination in microbiome studies  Journal Article
• Treating cattle with antibiotics affects greenhouse gas emissions, and microbiota in dung and dung beetles  Journal Article
• Twenty Important Research Questions in Microbial Exposure and Social Equity  Journal Article
• Using null models to infer microbial co-occurrence networks  Journal Article
• Variable influences of soil and seed-associated bacterial communities on the assembly of seedling microbiomes  Journal Article
• Variable responses of human and non-human primate gut microbiomes to a Western diet  Journal Article
• Variation of near surface atmosphere microbial communities at an urban and a suburban site in Philadelphia, PA, USA  Journal Article
• Variations in the microbiome due to storage preservatives are not large enough to obscure variations due to factors such as host population, host species, body site, and captivity  Journal Article
• Volatile organic compounds from leaf litter decomposition alter soil microbial communities and carbon dynamics  Journal Article
• Walls talk: Microbial biogeography of homes spanning urbanization  Journal Article

broader concept

• Environment and Public Health - Biota  PubMed MeSh Term

narrower concept

• Environment and Public Health - Gastrointestinal Microbiome  PubMed MeSh Term
• Environment and Public Health - Microbial Consortia  PubMed MeSh Term
• Environment and Public Health - Mycobiome  PubMed MeSh Term