Computer Simulation | CU Experts

subject area of

1-GHz repetition rate femtosecond OPO with stabilized offset between signal and idler frequency combs Journal Article
1450-nm high-brightness wavelength-beam combined diode laser array. Journal Article
A "cellular neuronal" approach to optimization problems Journal Article
A Comparison between Mouse, In Silico, and Robot Odor Plume Navigation Reveals Advantages of Mouse Odor Tracking Journal Article
A Comparison of Weighted Stochastic Simulation Methods for the Analysis of Genetic Circuits Journal Article
A Computational Workflow for the Automated Generation of Models of Genetic Designs Journal Article
A Diels-Alder modulated approach to control and sustain the release of dexamethasone and induce osteogenic differentiation of human mesenchymal stem cells Journal Article
A Mechanistic Model of the Enzymatic Hydrolysis of Cellulose Journal Article
A Model of the Surface Electromyogram in Pathological Tremor Journal Article
A Modeling Framework for Generation of Positional and Temporal Simulations of Transcriptional Regulation Journal Article
A Multiresolution Approach to Shear Wave Image Reconstruction Journal Article
A NUMERICAL FRAMEWORK FOR COMPUTING STEADY STATES OF STRUCTURED POPULATION MODELS AND THEIR STABILITY Journal Article
A Network Approach to Analyzing Highly Recombinant Malaria Parasite Genes Journal Article
A Simulated MS/MS Library for Spectrum-to-spectrum Searching in Large Scale Identification of Proteins Journal Article
A computational model of motion sickness dynamics during passive self-motion in the dark Journal Article
A concise total synthesis of largazole, solution structure, and some preliminary structure activity relationships Journal Article
A highly parallel simulation of patient-specific hepatic flows Journal Article
A hybrid particle-ensemble Kalman filter for problems with medium nonlinearity Journal Article
A mathematical model of cardiocyte Ca2+ dynamics with a novel representation of sarcoplasmic reticular Ca2+ control Journal Article
A mathematical model of the coupled mechanisms of cell adhesion, contraction and spreading. Journal Article
A neural network model of individual differences in task switching abilities Journal Article
A note on species richness and the variance of epidemic severity Journal Article
A novel in vitro and numerical analysis of shear-induced drug release from extended-release tablets in the fed stomach. Journal Article
A novel two-dimensional model for colloid transport in physically and geochemically heterogeneous porous media Journal Article
A parallel non-nested two-level domain decomposition method for simulating blood flows in cerebral artery of stroke patient Journal Article
A parameter sensitivity methodology in the context of HIV delay equation models Journal Article
A poroelastic finite element model of the bone-cartilage unit to determine the effects of changes in permeability with osteoarthritis Journal Article
A pulse sequence optimization method for assessment of nucleus size in q-space analysis of idealized cells Journal Article
A quantitative comparison of soft tissue compressive viscoelastic model accuracy Journal Article
A sibling method for identifying vQTLs Journal Article
A simplified, data-constrained approach to estimate the permafrost carbon-climate feedback Journal Article
A stomach road or "Magenstrasse" for gastric emptying. Journal Article
ANALYSIS OF THE CURRENT-DENSITY DISTRIBUTION FROM A TAPERED, GELLED-PAD EXTERNAL CARDIAC PACING ELECTRODE Journal Article
ASYMMETRIC VAULT MODIFICATION IN HOPI-CRANIA Journal Article
Accurate and efficient corrections for missing dispersion interactions in molecular Simulations Journal Article
Accurate structural correlations from maximum likelihood superpositions Journal Article
Addition of a non-photic component to a light-based mathematical model of the human circadian pacemaker Journal Article
Adsorption of peptides (A3, Flg, Pd2, Pd4) on gold and palladium surfaces by a coarse-grained Monte Carlo simulation Journal Article
Advantages in using multi-frequency driving ultrasound for optimizing echo particle image velocimetry techniques Journal Article
Aerosols from Fires: An Examination of the Effects on Ozone Photochemistry in the Western United States Journal Article
Aggregation kinetics of well and poorly differentiated human prostate cancer cells Journal Article
Alignment Controlled Growth of Single-Walled Carbon Nanotubes on Quartz Substrates Journal Article
Amplitude cancellation of motor-unit action potentials in the surface electromyogram can be estimated with spike-triggered averaging Journal Article
Amplitude cancellation reduces the size of motor unit potentials averaged from the surface EMG Journal Article
Amyloid fibril formation propensity is inherent into the hexapeptide tandemly repeating sequence of the central domain of silkmoth chorion proteins of the A-family Journal Article
An ESR analysis of the mechanism of pericyclic reactions of bicyclobutane Journal Article
An Eulerian/XFEM formulation for the large deformation of cortical cell membrane. Journal Article
An efficient parallel simulation of unsteady blood flows in patient-specific pulmonary artery Journal Article
An evolutionary model of osteoarthritis including articular cartilage damage, and bone remodeling in a computational study Journal Article
An integrative model of motor unit activity during sustained submaximal contractions Journal Article
An omnibus test for family-based association studies with multiple SNPs and multiple phenotypes Journal Article
An ultrasonic methodology for muscle cross section measurement to support space flight Journal Article
Analyses of normal and abnormal esophageal transport using computer simulations. Journal Article
Analysis of event-related fMRI data using best clustering bases Journal Article
Analysis of event-related fMRI data using best clustering bases Journal Article
Analyzing the super-resolution characteristics of focused-spot illumination approaches: Supplementary Materials Journal Article
Anionic derivatives of uracil: fragmentation and reactivity Journal Article
Anisotropic adaptive finite element method for modelling blood flow. Journal Article
Application of ICA to realistically simulated H-1-MRS data Journal Article
Architecture of the Synaptophysin/Synaptobrevin Complex: Structural Evidence for an Entropic Clustering Function at the Synapse Journal Article
Are Extended Twin Family Designs Worth the Trouble? A Comparison of the Bias, Precision, and Accuracy of Parameters Estimated in Four Twin Family Models Journal Article
Assessing a hydrodynamic description for instabilities in highly dissipative, freely cooling granular gases Journal Article
Assessment of simulations of a polar low with the Canadian Regional Climate Model Journal Article
Assortative mating biases marker-based heritability estimators Journal Article
Atmospheric Mercury in the Barnett Shale Area, Texas: Implications for Emissions from Oil and Gas Processing Journal Article
Atomistic protein folding simulations on the submillisecond time scale using worldwide distributed computing Journal Article
Automated discovery of functional generality of human gene expression programs. Journal Article
Bayesian-Inference-Driven Model Parametrization and Model Selection for 2CLJQ Fluid Models Journal Article
Best Practices in Free Energy Calculations for Drug Design Journal Article
BioSimulators: a central registry of simulation engines and services for recommending specific tools Journal Article
Biofunctionalization and immobilization of a membrane via peptide binding (CR3-1, S2) by a Monte Carlo simulation Journal Article
Blind prediction of cyclohexane-water distribution coefficients from the SAMPL5 challenge Journal Article
Buoyant plumes from solute gradients generated by non-motile Escherichia coli Journal Article
Call for transparency of COVI D-19 models Journal Article
Cell separation using tilted-angle standing surface acoustic waves Journal Article
Challenges in solving structures from radiation-damaged tomograms of protein nanocrystals assessed by simulation Journal Article
Chaotic advection and the emergence of tori in the Kuppers-Lortz state Journal Article
Characterizing Fugitive Methane Emissions in the Barnett Shale Area Using a Mobile Laboratory Journal Article
Chemistry of Aqueous Silica Nanoparticle Surfaces and the Mechanism of Selective Peptide Adsorption Journal Article
Chemotaxis receptor complexes: From signaling to assembly Journal Article
Classification of fMRI time series in a low-dimensional subspace with a spatial prior Journal Article
Climate-driven spatial dynamics of plague among prairie dog colonies Journal Article
Co-processing methane in high temperature steam gasification of biomass Journal Article
Coexisting chaotic and multi-periodic dynamics in a model of cardiac alternans Journal Article
Coherence-based quantification of acoustic clutter sources in medical ultrasound Journal Article
Color image projection through a strongly scattering wall Journal Article
Combinatorial games with a pass: A dynamical systems approach Journal Article
Comparison of efficiency and bias of free energies computed by exponential averaging, the Bennett acceptance ratio, and thermodynamic integration Journal Article
Comparison of methods for estimating the nucleotide substitution matrix Journal Article
Comparison of modeled and measured concentrations of airborne benzene from the use of petroleum-based solvents spiked with low levels of benzene Journal Article
Comparison of virtual source synthetic aperture beamforming with an element-based model Journal Article
Complex refractive index variation in proton-damaged diamond Journal Article
Composite bounds on the elastic modulus of bone Journal Article
Computational Assessment of the Relation Between Embolism Source and Embolus Distribution to the Circle of Willis for Improved Understanding of Stroke Etiology Journal Article
Computational Investigation of Transmural Differences in Left Ventricular Contractility Journal Article
Computational Modeling and Experimental Characterization of Extrusion Printing into Suspension Baths Journal Article
Computational Modeling for Biomimetic Sensors Journal Article
Computational Modeling in Pediatric Mental Health Journal Article
Computational Screening of Biomolecular Adsorption and Self-Assembly on Nanoscale Surfaces Journal Article
Computational Study of the Effect of Glyoxal-Sulfate Clustering on the Henry's Law Coefficient of Glyoxal Journal Article
Computational investigation of blood flow and flow-mediated transport in arterial thrombus neighborhood Journal Article
Computational modeling and evolutionary implications of biochemical reactions in bacterial microcompartments Journal Article
Computational sensitivity investigation of hydrogel injection characteristics for myocardial support Journal Article
Computational simulations of the total cavo-pulmonary connection: insights in optimizing numerical solutions Journal Article
Computer simulation of convective and diffusive transport of controlled-release drugs in the vitreous humor Journal Article
Computer systems are dynamical systems Journal Article
Conditions for mutation-order speciation Journal Article
Confirmation of K-Momentum Dark Exciton Vibronic Sidebands Using ¹³C-labeled, Highly Enriched (6,5) Single-walled Carbon Nanotubes Journal Article
Contribution of increasing CO₂ and climate to carbon storage by ecosystems in the United States Journal Article
Contributions of episodic retrieval and mentalizing to autobiographical thought: Evidence from functional neuroimaging, resting-state connectivity, and fMRI meta-analyses Journal Article
Controls on the Archean Climate System Investigated with a Global Climate Model Journal Article
Correction of sampling errors due to laser tuning rate fluctuations in swept-wavelength interferometry Journal Article
Coupling between protein and reaction dynamics in enzymatic processes: Application of Grote-Hynes theory to catechol O-methyltransferase Journal Article
Critical thresholds for eventual extinction in randomly disturbed population growth models Journal Article
Crossover between 2D and 3D Fluid Dynamics in the Diffusion of Islands in Ultrathin Freely Suspended Smectic Films Journal Article
Crystal structure of NFAT bound to the HIV-1 LTR tandem κB enhancer element Journal Article
Crystallography of honeycomb formation under geometric frustration. Journal Article
DETERMINATION OF DNA STRUCTURES BY NMR AND DISTANCE GEOMETRY TECHNIQUES - A COMPUTER-SIMULATION Journal Article
DETERMINING LOCAL CONFORMATIONAL VARIATIONS IN DNA - NUCLEAR-MAGNETIC-RESONANCE STRUCTURES OF THE DNA DUPLEXES D(CGCCTAATCG) AND D(CGTCACGCGC) GENERATED USING BACK-CALCULATION OF THE NUCLEAR OVERHAUSER EFFECT SPECTRA, A DISTANCE GEOMETRY ALGORITHM AND CONSTRAINED MOLECULAR-DYNAMICS Journal Article
Dehalogenation of Arenes via S(N)2 Reactions at Bromine: Competition with Nucleophilic Aromatic Substitution. Journal Article
Demonstration of an Ethane Spectrometer for Methane Source Identification Journal Article
Deprotonated Purine Dissociation: Experiments, Computations, and Astrobiological Implications Journal Article
Depth estimation and image recovery using broadband, incoherent illumination with engineered point spread functions Journal Article
Design and analysis of a robust genetic Muller C-element Journal Article
Design of polarization-dependent, flexural-torsional deformation in photo responsive liquid crystalline polymer networks Journal Article
Designing a Collaborative Visual Analytics Tool for Social and Technological Change Prediction Journal Article
Detecting autozygosity through runs of homozygosity: A comparison of three autozygosity detection algorithms Journal Article
Detecting the unique representation of motor-unit action potentials in the surface electromyogram Journal Article
Detection of protein secondary structures via the discrete wavelet transform Journal Article
Determining Synchrony Between Behavioral Time Series: An Application of Surrogate Data Generation for Establishing Falsifiable Null-Hypotheses Journal Article
Determining the viability response of pine pollen to atmospheric conditions during long-distance dispersal Journal Article
Direct visualization of optical frequency invisibility cloak based on silicon nanorod array Journal Article
Discovering Regulatory Overlapping RNA Transcripts Journal Article
Dispersal inference from population genetic variation using a convolutional neural network. Journal Article
Dispersive shock wave interactions and asymptotics Journal Article
Dissociative excitation transfer in the reaction of O-2(a(1)Delta(g)) with OH-(H2O)(1,2) clusters Journal Article
Dynamic Modeling of Cellular Populations within iBioSim Journal Article
Dynamic incorporation of multiple in silico functional annotations empowers rare variant association analysis of large whole-genome sequencing studies at scale Journal Article
Dynamics in hybrid complex systems of switches and oscillators Journal Article
Dynamics of spheroid self-assembly in liquid-overlay culture of DU 145 human prostate cancer cells Journal Article
EFFECT OF SURFACE ARCHITECTURE ON IN VIVO ULTRASOUND CONTRAST PERSISTENCE OF TARGETED SIZE-SELECTED MICROBUBBLES Journal Article
EXPERIMENTAL AND COMPUTATIONAL INVESTIGATION OF GUIDED WAVES IN A HUMAN SKULL Journal Article
Effects of Age on Melody and Timbre Perception in Simulations of Electro-Acoustic and Cochlear-Implant Hearing Journal Article
Effects of Noise, Nonlinear Processing, and Linear Filtering on Perceived Speech Quality Journal Article
Effects of Velocity and Weight Support on Ground Reaction Forces and Metabolic Power During Running Journal Article
Effects of using the unloaded configuration in predicting the in vivo diastolic properties of the heart Journal Article
Efficient pairwise RNA structure prediction and alignment using sequence alignment constraints Journal Article
Elasticity of short DNA molecules:: Theory and experiment for contour lengths of 0.6-7 μm Journal Article
Elasticity-mediated self-organization and colloidal interactions of solid spheres with tangential anchoring in a nematic liquid crystal Journal Article
Electric field fluctuations drive vibrational dephasing in water Journal Article
Electric field-induced emission enhancement and modulation in individual CdSe nanowires. Journal Article
Electro-optic response of the anticlinic, antiferroelectric liquid-crystal phase of a biaxial bent-core molecule with tilt angle near 45 degrees Journal Article
Empirical Bayes hierarchical models for regularizing maximum likelihood estimation in the matrix Gaussian Procrustes problem Journal Article
End of the Little Ice Age in the Alps forced by industrial black carbon Journal Article
Enhanced mechanosensing of cells in synthetic 3D matrix with controlled biophysical dynamics Journal Article
Environmental effects of large impacts on Mars Journal Article
Equivalence of time and aperture domain additive noise in ultrasound coherence Journal Article
Ergodic dynamics in a natural threshold system Journal Article
Estimating the proportion of variation in susceptibility to schizophrenia captured by common SNPs Journal Article
Estimating transitions between symptom severity states over time in schizophrenia: a Bayesian meta-analytic approach Journal Article
Evaluating backward probability model under various hydrogeologic and hydrologic conditions Journal Article
Evaluating the Contribution of Model Complexity in Predicting Robustness in Synthetic Genetic Circuits. Journal Article
Evaluating the effects of climate change on summertime ozone using a relative response factor approach for policymakers Journal Article
Evaluation of the Transverse Oscillation Technique for Cardiac Phased Array Imaging: A Theoretical Study Journal Article
Evidence that opioids may have toll-like receptor 4 and MD-2 effects Journal Article
Exact-mass library for pesticides using a molecular-feature database Journal Article
Excited State Electronic Landscape of mPlum Revealed by Two-Dimensional Double Quantum Coherence Spectroscopy Journal Article
Experimental and Theoretical Study of the OH Vibrational Spectra and Overtone Chemistry of Gas-Phase Vinylacetic Acid Journal Article
Explaining object-based deficits in unilateral neglect without object-based frames of reference. Journal Article
Exploiting conformational dynamics to facilitate formation and trapping of electron-transfer photoproducts in metal complexes. Journal Article
Exploring the Contextual Sensitivity of Factors that Determine Cell-to-Cell Variability in Receptor-Mediated Apoptosis Journal Article
FITTING GENETIC MODELS WITH LISREL - HYPOTHESIS-TESTING Journal Article
Fabrication and Modeling of Dynamic Multipolymer Nanofibrous Scaffolds Journal Article
Finite element implementation of a multiscale model of the human lens capsule Journal Article
First-order system least squares for elastohydrodynamics with application to flow in compliant blood vessels. Journal Article
First-order system least-squares (FOSLS) for modeling blood flow Journal Article
Flexible approaches for estimating partial eta squared in mixed-effects models with crossed random factors Journal Article
Flow inside a bone scaffold: Visualization using 3D phase contrast MRI and comparison with numerical simulations Journal Article
Formation of Semisolid, Oligomerized Aqueous SOA: Lab Simulations of Cloud Processing Journal Article
Frequency-Dependent Spatial Coherence in Conventional and Chirp Transmissions Journal Article
From an Executive Network to Executive Control: A Computational Model of the n-back Task Journal Article
Gas-Phase Acidities of Nitrated Azoles as Determined by the Extended Kinetic Method and Computations Journal Article
Gastric flow and mixing studied using computer simulation. Journal Article
GeneEvolve: a fast and memory efficient forward-time simulator of realistic whole-genome sequence and SNP data Journal Article
Genetic Circuit Dynamics: Hazard and Glitch Analysis Journal Article
Genetic algorithm optimization for focusing through turbid media in noisy environments Journal Article
Geographically skewed recruitment and COVID-19 seroprevalence estimates: a cross-sectional serosurveillance study and mathematical modelling analysis Journal Article
Graded negative index lens by photonic crystals Journal Article
Greenland temperature response to climate forcing during the last deglaciation Journal Article
Guidelines for the analysis of free energy calculations Journal Article
Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition) Journal Article
Hallucinogen persisting perception disorder in neuronal networks with adaptation Journal Article
Harmonizing semantic annotations for computational models in biology Journal Article
High-efficiency rotating point spread functions Journal Article
High-resolution computational models of genome binding events Journal Article
Highly parallel acoustic assembly of microparticles into well-ordered colloidal crystallites Journal Article
How complementarity and selection affect the relationship between ecosystem functioning and stability Journal Article
Human mobility and the spatial transmission of influenza in the United States Journal Article
Hydrodynamic Effects on Drug Dissolution and Deaggregation in the Small Intestine-A Study with Felodipine as a Model Drug. Journal Article
ISOLATION OF HIGH-AFFINITY RNA LIGANDS TO HIV-1 INTEGRASE FROM A RANDOM POOL Journal Article
Identification of optimal feedback control rules from micro-quadrotor and insect flight trajectories Journal Article
Impact ionization can explain carrier multiplication in PbSe quantum dots Journal Article
Impact of historical land-use changes on greenhouse gas exchange in the US Great Plains, 1883-2003 Journal Article
Implications of Space Suit Injury Risk for Developing Computational Performance Models Journal Article
Incorporation of variability into the modeling of viral delays in HIV infection dynamics Journal Article
Increased sensitivity in neuroimaging analyses using robust regression Journal Article
Independent effects of weight and mass on plantar flexor activity during walking: implications for their contributions to body support and forward propulsion Journal Article
Independent metabolic costs of supporting body weight and accelerating body mass during walking Journal Article
Individual Differences in Multitasking Ability and Adaptability Journal Article
Inertial particle dynamics in large artery flows - Implications for modeling arterial embolisms Journal Article
Influence of Distal Resistance and Proximal Stiffness on Hemodynamics and RV Afterload in Progression and Treatments of Pulmonary Hypertension: A Computational Study with Validation Using Animal Models Journal Article
Influence of amplitude cancellation on the accuracy of determining the onset of muscle activity from the surface electromyogram Journal Article
Influence of amplitude cancellation on the simulated surface electromyogram Journal Article
Influence of fatigue on the simulated relation between the amplitude of the surface electromyogram and muscle force Journal Article
Influence of motor unit properties on the size of the simulated evoked surface EMG potential Journal Article
Information Space Receding Horizon Control Journal Article
Infrasonic ray tracing applied to mesoscale atmospheric structures: Refraction by hurricanes Journal Article
Inhibition Causes Ceaseless Dynamics in Networks of Excitable Nodes Journal Article
Instabilities in granular binary mixtures at moderate densities Journal Article
Inter-comparisons of VOC oxidation mechanisms based on box model: A focus on OH reactivity Journal Article
Inverse modeling methods for indoor airborne pollutant tracking: literature review and fundamentals Journal Article
Investigating clot-flow interactions by integrating intravital imaging with in silico modeling for analysis of flow, transport, and hemodynamic forces Journal Article
Iron Pyrite Nanocubes: Size and Shape Considerations for Photovoltaic Application Journal Article
JSBML 1.0: providing a smorgasbord of options to encode systems biology models Journal Article
Joint experimental and theoretical study of vibrationally inelastic electron scattering on propane Journal Article
Kinesin-5-independent mitotic spindle assembly requires the antiparallel microtubule crosslinker Ase1 in fission yeast Journal Article
Klebsiella pneumoniae flocculation dynamics Journal Article
LIMITATIONS OF THE SURFACE ELECTROMYOGRAPHY TECHNIQUE FOR ESTIMATING MOTOR UNIT SYNCHRONIZATION Journal Article
Laplacian Dynamics with Synthesis and Degradation Journal Article
Large-scale simulations of concentrated emulsion flows Journal Article
Leveraging whole genome sequencing data for demographic inference with approximate Bayesian computation Journal Article
Limits of 3D dipole localization and orientation estimation for single-molecule imaging: towards Green's tensor engineering Journal Article
Link prediction accuracy on real-world networks under non-uniform missing-edge patterns. Journal Article
Liquid in the gastroesophageal segment promotes reflux, but compliance does not: a mathematical modeling study. Journal Article
Localist attractor networks Journal Article
Location identification for indoor instantaneous point contaminant source by probability-based inverse Computational Fluid Dynamics modeling Journal Article
Low-Dimensional Representation of Genomic Sequences Journal Article
Marine wild-capture fisheries after nuclear war Journal Article
Markov chain formalism for polarized light transfer in plane-parallel atmospheres, with numerical comparison to the Monte Carlo method Journal Article
Maximizing Students' Retention via Spaced Review: Practical Guidance From Computational Models of Memory Journal Article
Measurement of Lamb wave polarization using a one-dimensional scanning laser vibrometer (L) Journal Article
Mechanism of Cdc25B Phosphatase with the Small Molecule Substrate p-Nitrophenyl Phosphate from QM/MM-MFEP Calculations Journal Article
Mechanisms of Chromosome biorientation and bipolar spindle assembly analyzed by computational modeling Journal Article
Membrane-docking loops of the cPLA2 C2 domain: detailed structural analysis of the protein-membrane interface via site-directed spin-labeling. Journal Article
Merging theory and experiments to predict and understand coextinctions Journal Article
Micro-bioreactor array for controlling cellular microenvironments Journal Article
Microbial community resemblance methods differ in their ability to detect biologically relevant patterns Journal Article
Microscopic origins of anisotropic active stress in motor-driven nematic liquid crystals Journal Article
Microscopic origins of first-order Sm-A-Sm-C phase behavior in de Vries smectic liquid crystals Journal Article
Microtubule Depolymerization by the Kinesin-8 Motor Kip3p: A Mathematical Model Journal Article
Minimal sensor count approach to fuzzy logic rotary blood pump flow control Journal Article
Mode profile imaging and loss measurement for uniform and tapered single-mode 3D waveguides in diffusive photopolymer Journal Article
Modeling 3-D compliant blood flow with fosls Journal Article
Modeling a Snap-Action, Variable-Delay Switch Controlling Extrinsic Cell Death Journal Article
Modeling blood flow around a thrombus using a hybrid particle-continuum approach Journal Article
Modeling keratinocyte wound healing dynamics: Cell-cell adhesion promotes sustained collective migration Journal Article
Modeling somatic evolution in tumorigenesis Journal Article
Modeling the efficiency of Forster resonant energy transfer from energy relay dyes in dye-sensitized solar cells Journal Article
Modulation of leg muscle function in response to altered demand for body support and forward propulsion during walking Journal Article
Monitoring Performance Degradation of Cerebellar Functions Using Computational Neuroscience Methods: Implications on Neurological Diseases Journal Article
Monitoring molecular dynamics using coherent electrons from high harmonic generation Journal Article
Motion of deformable drops through granular media and other confined geometries Journal Article
Motor unit recruitment strategies and muscle properties determine the influence of synaptic noise on force steadiness Journal Article
Motor-unit synchronization alters spike-triggered average force in simulated contractions Journal Article
Motor-unit synchronization increases EMG amplitude and decreases force steadiness of simulated contractions Journal Article
Moving pictures of the human microbiome Journal Article
Multi-microjoule, MHz repetition rate Ti:sapphire ultrafast regenerative amplifier system Journal Article
Multiple exciton generation in films of electronically coupled PbSe quantum dots Journal Article
Multiple exciton generation in quantum dots versus singlet fission in molecular chromophores for solar photon conversion Journal Article
Multiple features of motor-unit activity influence force fluctuations during isometric contractions Journal Article
Multiscale mechanical characterization and computational modeling of fibrin gels Journal Article
Multiscale model predicts increasing focal adhesion size with decreasing stiffness in fibrous matrices Journal Article
Multistate reweighting and configuration mapping together accelerate the efficiency of thermodynamic calculations as a function of molecular geometry by orders of magnitude Journal Article
Near-field imaging of optical antenna modes in the mid-infrared Journal Article
Near-field measurement of infrared coplanar strip transmission line attenuation and propagation constants Journal Article
Networks that learn the precise timing of event sequences Journal Article
Neural field model of memory-guided search Journal Article
Noise properties of microwave signals synthesized with femtosecond lasers Journal Article
Nonadaptive explanations for signatures of partial selective sweeps in Drosophila Journal Article
Nonadiabatic trajectory studies of NaI(H(2)O)(n) photodissociation dynamics Journal Article
Nonequilibrium evolution of strong-field anisotropic ionized electrons towards a delayed plasma-state Journal Article
Noninvasive measurement of steady and pulsating velocity profiles and shear rates in arteries using echo PIV: In vitro validation studies Journal Article
Nonlinear shallow ocean-wave soliton interactions on flat beaches Journal Article
Novel Ligands for a Purine Riboswitch Discovered by RNA-Ligand Docking Journal Article
Nucleosome and chromatin fiber dynamics Journal Article
Obesity does not increase external mechanical work per kilogram body mass during walking Journal Article
Object-based attention and occlusion: Evidence from normal participants and a computational model Journal Article
Observational evidence for interhemispheric hydroxyl-radical parity Journal Article
Observed Arctic sea-ice loss directly follows anthropogenic CO₂ emission Journal Article
Occlusion, symmetry, and object-based attention: Reply to Saiki (2000) Journal Article
On Coupling a Lumped Parameter Heart Model and a Three-Dimensional Finite Element Aorta Model Journal Article
On the molecular mechanism of drug intercalation into DNA: A simulation study of the intercalation pathway, free energy, and DNA structural changes Journal Article
On the use of star-shaped genealogies in inference of coalescence times Journal Article
Open Force Field Evaluator: An Automated, Efficient, and Scalable Framework for the Estimation of Physical Properties from Molecular Simulation Journal Article
Opening of nucleic-acid double strands by helicases:: Active versus passive opening -: art. no. 011904 Journal Article
Optimal Starting Block Configuration in Sprint Running: A Comparison of Biological and Prosthetic Legs Journal Article
Optimizing immunization protocols to elicit broadly neutralizing antibodies Journal Article
Ordered droplet structures at the liquid crystal surface and elastic-capillary colloidal interactions Journal Article
Outflow boundary conditions for 3D simulations of non-periodic blood flow and pressure fields in deformable arteries Journal Article
Parallelized-over-parts computation of absolute binding free energy with docking and molecular dynamics Journal Article
Partitioning the Metabolic Cost of Human Running: A Task-by-Task Approach Journal Article
Patient-Specific Modeling of Blood Flow and Pressure in Human Coronary Arteries Journal Article
Pattern Formation in the Longevity-Related Expression of Heat Shock Protein-16.2 in Caenorhabditis elegans Journal Article
People Efficiently Explore the Solution Space of the Computationally Intractable Traveling Salesman Problem to Find Near-Optimal Tours Journal Article
Perfusion applied to a 3D model of bone metastasis results in uniformly dispersed mechanical stimuli Journal Article
Photoaffinity cross-linking and RNA structure analysis Journal Article
Photoinduced Intramolecular Electron Transfer in Conjugated Perylene Bisimide-Dithienothiophene Systems: A Comparative Study of a Small Molecule and a Polymer Journal Article
Plant Dynamics, Birth-Jump Processes, and Sharp Traveling Waves Journal Article
Polymerizable Vancomycin Derivatives for Bactericidal Biomaterial Surface Modification: Structure-Function Evaluation Journal Article
Postfragmentation density function for bacterial aggregates in laminar flow Journal Article
Potential Climatic Impact of Organic Haze on Early Earth Journal Article
Power of linkage versus association analysis of quantitative traits, by use of variance-components models, for sibship data Journal Article
Predicting community responses to perturbations in the face of imperfect knowledge and network complexity. Journal Article
Preflight virtual reality training as a countermeasure for space motion sickness and disorientation Journal Article
Probabilistic Modeling of Reprogramming to Induced Pluripotent Stem Cells Journal Article
Product Binding Varies Dramatically between Processive and Nonprocessive Cellulase Enzymes Journal Article
Production-passage-time approximation: A new approximation method to accelerate the simulation process of enzymatic reactions Conference Proceeding
Projected Effects of Climate and Development on California Wildfire Emissions through 2100 Journal Article
Propagation of fronts in the Fisher-Kolmogorov equation with spatially varying diffusion Journal Article
Proposed Data Model for the Next Version of the Synthetic Biology Open Language Journal Article
Quantitative correlation of absolute hydroxyl radical rate constants with mon-isolated effluent organic matter bulk properties in water Journal Article
RAREsim: A simulation method for very rare genetic variants Journal Article
RNA Pol II transcription model and interpretation of GRO-seq data Journal Article
Record-breaking avalanches in driven threshold systems Journal Article
Reducing the variability of neural responses: A computational theory of spike-timing-dependent plasticity Journal Article
Reduction in Haze Formation Rate on Prebiotic Earth in the Presence of Hydrogen Journal Article
Response functions for dimers and square-symmetric molecules in four-wave-mixing experiments with polarized light Journal Article
Response of traveling waves to transient inputs in neural fields Journal Article
Rethinking infant knowledge: Toward an adaptive process account of successes and failures in object permanence tasks Journal Article
Role of a heterogeneous free state in the formation of a specific RNA-theophylline complex Journal Article
Role of large-scale velocity fluctuations in a two-vortex kinematic dynamo Journal Article
Rontgen's electrode-free elastomer actuators without electromechanical pull-in instability Journal Article
Running with horizontal pulling forces: the benefits of towing Journal Article
SELEXION - SYSTEMATIC EVOLUTION OF LIGANDS BY EXPONENTIAL ENRICHMENT WITH INTEGRATED OPTIMIZATION BY NONLINEAR-ANALYSIS Journal Article
SOME ENGINEERING MODELS FOR INTERACTIONS OF ELECTRIC AND MAGNETIC-FIELDS WITH BIOLOGICAL-SYSTEMS Journal Article
STRANGE BETA: An assistance system for indoor rock climbing route setting Journal Article
Sampling errors create bias in Markov models for community dynamics: the problem and a method for its solution. Journal Article
Scalable printed electronics: an organic decoder addressing ferroelectric non-volatile memory Journal Article
Scale-free networks are rare Journal Article
Scaling of earthquake models with inhomogeneous stress dissipation Journal Article
Self-assembly of skyrmion-dressed chiral nematic colloids with tangential anchoring Journal Article
Self-induced docking site of a deeply embedded peripheral membrane protein Journal Article
Sensitivity analysis of a nonlinear lumped parameter model of HIV infection dynamics Journal Article
Sensitivity of ecological models to their climate drivers: Statistical ensembles for forcing Journal Article
Sensitivity of the cross-correlaton between simulated surface EMGs for two muscles to detect motor unit synchronization Journal Article
Sensory feedback in a bump attractor model of path integration Journal Article
Sequential Dependencies in Driving Journal Article
Shape-dependent dispersion and alignment of nonaggregating plasmonic gold nanoparticles in lyotropic and thermotropic liquid crystals Journal Article
Simulating Ensembles of Source Water Quality Using a K-Nearest Neighbor Resampling Approach Journal Article
Simulation of branching blood flows on parallel computers Journal Article
Simulation of folding of a small alpha-helical protein in atomistic detail using worldwide-distributed computing Journal Article
Simulation of unsteady blood flows in a patient-specific compliant pulmonary artery with a highly parallel monolithically coupled fluid-structure interaction algorithm Journal Article
Simultaneous border-collision and period-doubling bifurcations Journal Article
Size and Composition Dependent Multiple Exciton Generation Efficiency in PbS, PbSe, and PbS_xSe_1-x Alloyed Quantum Dots Journal Article
Size and composition distribution dynamics of alloy nanoparticle electrocatalysts probed by anomalous small angle X-ray scattering (ASAXS) Conference Proceeding
Smectic order, pinning, and phase transition in a smectic-liquid-crystal cell with a random substrate Journal Article
Solid-solid contacts due to surface roughness and their effects on suspension behaviour Journal Article
Solvation free energies of amino acid side chain analogs for common molecular mechanics water models Journal Article
Space charge limited current measurements on conjugated polymer films using conductive atomic force microscopy Journal Article
Sparse Gamma Rhythms Arising through Clustering in Adapting Neuronal Networks Journal Article
Spatial dimension and the dynamics of supercooled liquids Journal Article
Spatially explicit models of divergence and genome hitchhiking Journal Article
Spatiotemporal dynamics of calcium-driven cardiac alternans Journal Article
Spatiotemporal intracellular calcium dynamics during cardiac alternans Journal Article
Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2019 Journal Article
Specifications of standards in systems and synthetic biology: status and developments in 2021 Journal Article
Standing surface acoustic wave (SSAW)-based cell washing Journal Article
Statistical modelling of networked human-automation performance using working memory capacity Journal Article
Stereoretentive Intramolecular Glycosyl Cross-Coupling: Development, Scope, and Kinetic Isotope Effect Study Journal Article
Sticky surface: sphere-sphere adhesion dynamics Journal Article
Strain rate hardening: A hidden but critical mechanism for biological composites? Journal Article
Structural rearrangements in tubulin following microtubule formation Journal Article
Structure and dynamics of liquid crystalline pattern formation in drying droplets of DNA Journal Article
Survey of the Reactivity of O-2(a (1)Delta(g)) with Negative Ions Journal Article
Synaptic efficacy shapes resource limitations in working memory Journal Article
Synchronization in large directed networks of coupled phase oscillators Journal Article
Synthetic Aperture Focusing for Multi-Covariate Imaging of Sub-Resolution Targets Journal Article
Systems theory of Smad signalling Journal Article
TESTING STRUCTURAL EQUATION MODELS FOR TWIN DATA USING LISREL Journal Article
THESEUS: maximum likelihood superpositioning and analysis of macromolecular structures Journal Article
Tangle: A Metric for Quantifying Complexity and Erratic Behavior in Short Time Series Journal Article
Temperature Control of Fimbriation Circuit Switch in Uropathogenic Escherichia coli: Quantitative Analysis via Automated Model Abstraction Journal Article
Test sensitivity is secondary to frequency and turnaround time for COVID-19 screening Journal Article
Testing computational models of dopamine and noradrenaline dysfunction in attention deficit/hyperactivity disorder Journal Article
Testing hypotheses regarding the causes of comorbidity: Examining the underlying deficits of comorbid disorders Journal Article
The 3.2 Å Resolution Structure of a Receptor:CheA:CheW Signaling Complex Defines Overlapping Binding Sites and Key Residue Interactions within Bacterial Chemosensory Arrays Journal Article
The Assembly of Ecological Communities Inferred from Taxonomic and Functional Composition Journal Article
The Developmental Dynamics of Terrorist Organizations Journal Article
The Discovery of furo[2,3-c]pyridine-based indanone oximes as potent and selective B-Raf inhibitors Journal Article
The Impact of Acoustic Clutter on Large Array Abdominal Imaging Journal Article
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Journal Article
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Release 2 Journal Article
The Trouble with Chemical Energy: Why Understanding Bond Energies Requires an Interdisciplinary Systems Approach Journal Article
The development of a material model and wheel-tissue interaction for simulating wheeled surgical robot mobility Journal Article
The effects of relational structure on analogical learning Journal Article
The importance of imagination (or lack thereof) in artificial, human and quantum decision making Journal Article
The inclusion of measured covariates in the Neale and Kendler model fitting approach Journal Article
The mathematics of SELEX against complex targets Journal Article
The mechanical advantage of local longitudinal shortening on peristaltic transport. Journal Article
The role of chemistry and pH of solid surfaces for specific adsorption of biomolecules in solution-accurate computational models and experiment Journal Article
The role of structured stirring and mixing on gamete dispersal and aggregation in broadcast spawning Journal Article
The validity of the Neale and Kendler model-fitting approach in examining the etiology of comorbidity Journal Article
TheoH and Allan deviation as power-law noise estimators Journal Article
Theoretical models of the influence of genomic architecture on the dynamics of speciation Journal Article
Time and Frequency-Domain Measurement of Ground-State Recovery Times in Red Fluorescent Proteins Journal Article
Toward a low-jitter 10 GHz pulsed source with an optical frequency comb generator Journal Article
Toward the cellular-scale simulation of motor-driven cytoskeletal assemblies Journal Article
Transcription factor enrichment analysis (TFEA) quantifies the activity of multiple transcription factors from a single experiment Journal Article
Transitions between paraelectric and ferroelectric phases of bent-core smectic liquid crystals in the bulk and in thin freely suspended films Journal Article
Triphasic mixture model of cell-mediated enzymatic degradation of hydrogels Journal Article
Tunable optical metamaterial based on liquid crystal-gold nanosphere composite Journal Article
Tuning Reaction and Diffusion Mediated Degradation of Enzyme-Sensitive Hydrogels Journal Article
Twist-bend heliconical chiral nematic liquid crystal phase of an achiral rigid bent-core mesogen Journal Article
Ultrafast Energy Transfer from the Intramolecular Bending Vibration to Librations in Liquid Water Journal Article
Ultrafast exciton fine structure relaxation dynamics in lead chalcogenide nanocrystals Journal Article
Ultrasound Lesion Detectability as a Distance Between Probability Measures Journal Article
Understanding and Manipulating Helical Nanofilaments in Binary Systems with Achiral Dopants Journal Article
Understanding the Spatiotemporal Degradation Behavior of Aggrecanase-Sensitive Poly(ethylene glycol) Hydrogels for Use in Cartilage Tissue Engineering Journal Article
Unfolding a codimension-two, discontinuous, Andronov-Hopf bifurcation Journal Article
Use of X-Ray Diffraction, Molecular Simulations, and Spectroscopy to Determine the Molecular Packing in a Polymer-Fullerene Bimolecular Crystal Journal Article
Using Computational Fluid Dynamics Modeling to Evaluate the Design of Hospital Ultraviolet Germicidal Irradiation Systems for Inactivating Airborne Mycobacteria Journal Article
Using Molecular Simulation to Study Biocatalysis in Ionic Liquids Chapter
Using coalescent simulations to test the impact of quaternary climate cycles on divergence in an alpine plant-insect association Journal Article
Using demography and movement behavior to predict range expansion of the southern sea otter. Journal Article
Using multispecies occupancy models to improve the characterization and understanding of metacommunity structure Journal Article
Using the nucleotide substitution rate matrix to detect horizontal gene transfer Journal Article
Variance-components QTL linkage analysis of selected and non-normal samples: Conditioning on trait values Journal Article
Vertically resolved separation of dust and other aerosol types by a new lidar depolarization method Journal Article
Vibrational overtone induced elimination reactions within hydrogen-bonded molecular clusters: the dynamics of water catalyzed reactions in CH2FOH center dot(H2O) Journal Article
Wavelet-based estimation of a semiparametric generalized linear model of fMRI time-series Journal Article
What can genes tell us about the relationship between education and health? Journal Article
When uncertain, does human self-motion decision-making fully utilize complete information? Journal Article
Why Water Reorientation Slows without Iceberg Formation around Hydrophobic Solutes Journal Article
Worth the Weight? Recent Trends in Obstetric Practices, Gestational Age, and Birth Weight in the United States Journal Article
Wyoming Cloud Lidar: instrument description and applications Journal Article

broader concept

Computing Methodologies PubMed MeSh Term

VIVO

Computer Simulation PubMed MeSh Term

Overview

subject area of

broader concept

narrower concept