Genetic Structures - Chromatin | CU Experts

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'Lnc'-ing enhancers to MYC regulation Journal Article
25 years since the high-resolution structure of the nucleosome: An interview with Dr. Karolin Luger Journal Article
A TAD boundary is preserved upon deletion of the CTCF-rich Firre locus Journal Article
A Thermodynamic Model for Nap1-Histone Interactions Journal Article
A charged and contoured surface on the nucleosome regulates chromatin compaction Journal Article
A feed-forward repression mechanism anchors the Sin3/histone deacetylase and N-CoR/SMRT corepressors on chromatin Journal Article
A generative model for the behavior of RNA polymerase Journal Article
A quantitative investigation of linker histone interactions with nucleosomes and chromatin Journal Article
Aberrant chromatin reorganization in cells from diseased fibrous connective tissue in response to altered chemomechanical cues Journal Article
Activating RNAs associate with Mediator to enhance chromatin architecture and transcription Journal Article
Activator-Mediator binding regulates Mediator-cofactor interactions Journal Article
Alternative Lengthening of Telomeres is characterized by reduced compaction of telomeric chromatin Journal Article
An Essential Role of Variant Histone H3.3 for Ectomesenchyme Potential of the Cranial Neural Crest Journal Article
Archaea: The Final Frontier of Chromatin Journal Article
Archaeal DNA on the histone merry-go-round Journal Article
Archaeal chromatin 'slinkies' are inherently dynamic complexes with deflected DNA wrapping pathways Journal Article
Assembly of Nucleosomal Arrays from Recombinant Core Histones and Nucleosome Positioning DNA Journal Article
Automodification switches PARP-1 function from chromatin architectural protein to histone chaperone Journal Article
Biochemical and Biophysical Methods for Analysis of Poly(ADP-Ribose) Polymerase 1 and Its Interactions with Chromatin Journal Article
Bivalent interaction of the PZP domain of BRPF1 with the nucleosome impacts chromatin dynamics and acetylation Journal Article
CDK8 is a stimulus-specific positive coregulator of p53 target genes Journal Article
CENP-N promotes the compaction of centromeric chromatin Journal Article
CHROMATIN STRUCTURE AT THE REPLICATION ORIGINS AND TRANSCRIPTION-INITIATION REGIONS OF THE RIBOSOMAL-RNA GENES OF TETRAHYMENA Journal Article
CHROMATIN STRUCTURE OF THE MOLECULAR ENDS OF OXYTRICHA MACRONUCLEAR DNA - PHASED NUCLEOSOMES AND A TELOMERIC COMPLEX Journal Article
CHROMATIN STRUCTURE OF THE RIBOSOMAL-RNA GENES OF TETRAHYMENA-THERMOPHILA AS ANALYZED BY TRIMETHYLPSORALEN CROSSLINKING INVIVO Journal Article
Cell-Type-Specific Chromatin States Differentially Prime Squamous Cell Carcinoma Tumor-Initiating Cells for Epithelial to Mesenchymal Transition Journal Article
Cellular zinc status alters chromatin accessibility and binding of p53 to DNA. Journal Article
Chromatin and transcriptional signatures for Nodal signaling during endoderm formation in hESCs Journal Article
Chromatin environment, transcriptional regulation, and splicing distinguish lincRNAs and mRNAs Journal Article
Chromatin remodeling due to degradation of citrate carrier impairs osteogenesis of aged mesenchymal stem cells Journal Article
Chromatin signature of embryonic pluripotency is established during genome activation Journal Article
Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals Journal Article
Competition between PRC2.1 and 2.2 subcomplexes regulates PRC2 chromatin occupancy in human stem cells Journal Article
Constitutive centromere-associated network contacts confer differential stability on CENP-A nucleosomes in vitro and in the cell Journal Article
Coordinated Action of Nap1 and RSC in Disassembly of Tandem Nucleosomes Journal Article
Cryo-EM structures of PRC2 simultaneously engaged with two functionally distinct nucleosomes Journal Article
Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions Journal Article
DIFFERENT NUCLEOSOME SPACING IN TRANSCRIBED AND NON-TRANSCRIBED REGIONS OF THE RIBOSOMAL-RNA GENE IN TETRAHYMENA-THERMOPHILA Journal Article
DNMT1 inhibition by pUG-fold quadruplex RNA. Journal Article
Deformation Microscopy for Dynamic Intracellular and Intranuclear Mapping of Mechanics with High Spatiotemporal Resolution Journal Article
Differential contribution of steady-state RNA and active transcription in chromatin organization Journal Article
Disparate chromatin landscapes and kinetics of inactivation impact differential regulation of p53 target genes Journal Article
Diverse chromatin remodeling genes antagonize the Rb-involved SynMuv pathways in C. elegans Journal Article
Doxorubicin impacts chromatin binding of HMGB1, Histone H1 and retinoic acid receptor Journal Article
Dynamic nucleosomes Journal Article
Effects of photochemically activated alkylating agents of the FR900482 family on chromatin Journal Article
EvoChromo: towards a synthesis of chromatin biology and evolution Journal Article
Expanded encyclopaedias of DNA elements in the human and mouse genomes Journal Article
Extracellular signal-regulated kinase activates topoisomerase IIα through a mechanism independent of phosphorylation Journal Article
FEAR antiviral response pathway is independent of interferons and countered by poxvirus proteins Journal Article
Fission yeast telosomes: non-canonical histone-containing chromatin structures dependent on shelterin and RNA Journal Article
From bacteria to humans, chromatin to elongation, and activation to repression: The expanding roles of noncoding RNAs in regulating transcription Journal Article
Functional demarcation of active and silent chromatin domains in human HOX loci by Noncoding RNAs Journal Article
GENE-SIZE DNA-MOLECULES IN OXYTRICHA Journal Article
Gene-specific repression of the p53 target gene PUMA via intragenic CTCF-Cohesin binding Journal Article
Global regulation of post-translational modifications on core histones Journal Article
H2A.Z alters the nucleosome surface to promote HP1α-mediated chromatin fiber folding Journal Article
Histone Chaperone Nap1 Is a Major Regulator of Histone H2A-H2B Dynamics at the Inducible GAL Locus Journal Article
Histone chaperone FACT FAcilitates Chromatin Transcription: mechanistic and structural insights Journal Article
Histone chaperone FACT action during transcription through chromatin by RNA polymerase II Journal Article
Histone chaperones and nucleosome assembly Journal Article
Histones with an unconventional DNA-binding mode in vitro are major chromatin constituents in the bacterium Bdellovibrio bacteriovorus Journal Article
Human CRSP interacts with RNA polymerase IICTD and adopts a specific CTD-bound conformation Journal Article
Human FACT subunits coordinate to catalyze both disassembly and reassembly of nucleosomes Journal Article
Human TFIIH Kinase CDK7 Regulates Transcription-Associated Chromatin Modifications Journal Article
Image-derived modeling of nucleus strain amplification associated with chromatin heterogeneity Journal Article
In Vitro Chromatin Assembly: Strategies and Quality Control Journal Article
In new company: U1 snRNA associates with TAF15 Journal Article
Integrated genomics approaches identify transcriptional mediators and epigenetic responses to Afghan desert particulate matter in small airway epithelial cells Journal Article
Integrative Analyses of Human Reprogramming Reveal Dynamic Nature of Induced Pluripotency Journal Article
Interactions of HMGB Proteins with the Genome and the Impact on Disease Journal Article
Leveraging dominant-negative histone H3 K-to-M mutations to study chromatin during differentiation and development Journal Article
Live-cell imaging reveals the dynamics of PRC2 and recruitment to chromatin by SUZ12-associated subunits Journal Article
Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis Journal Article
MOF-mediated histone H4 Lysine 16 acetylation governs mitochondrial and ciliary functions by controlling gene promoters Journal Article
Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression Journal Article
Mcm10 and the MCM2-7 complex interact to initiate DNA synthesis and to release replication factors from origins Journal Article
Mechanical memory stored through epigenetic remodeling reduces cell therapeutic potential Journal Article
Mechanistic insights into histone deposition and nucleosome assembly by the chromatin assembly factor-1 Journal Article
Mediator and cohesin connect gene expression and chromatin architecture Journal Article
Modular regulatory principles of large non-coding RNAs Journal Article
Molecular analysis of PRC2 recruitment to DNA in chromatin and its inhibition by RNA Journal Article
Molecular functions of the TLE tetramerization domain in Wnt target gene repression Journal Article
Multiple RNA- and DNA- binding proteins exhibit direct transfer of polynucleotides with implications for target- site search Journal Article
Mutation of the TERT promoter, switch to active chromatin, and monoallelic TERT expression in multiple cancers Journal Article
Nascent transcript analysis of glucocorticoid crosstalk with TNF defines primary and cooperative inflammatory repression Journal Article
New insights into nucleosome and chromatin structure: an ordered state or a disordered affair? Journal Article
Non-coding RNAs: key regulators of mammalian transcription Journal Article
Non-coding-RNA regulators of RNA polymerase II transcription Journal Article
Nuclear and cytoplasmic dynamics of sperm penetration, pronuclear formation and microtubule organization during fertilization and early preimplantation development in the human Journal Article
Nuclear deformation guides chromatin reorganization in cardiac development and disease Journal Article
Nuclear envelope mechanobiology: linking the nuclear structure and function Journal Article
Nucleosome and chromatin fiber dynamics Journal Article
Nucleosome structure and dynamics are coming of age Journal Article
Nudt21 Controls Cell Fate by Connecting Alternative Polyadenylation to Chromatin Signaling Journal Article
PRC2 direct transfer from G-quadruplex RNA to dsDNA has implications for RNA-binding chromatin modifiers Journal Article
PROTEINS OF FRIEND LEUKEMIA-CELLS - COMPARISON OF HEMOGLOBIN-SYNTHESIZING AND NON-INDUCED POPULATIONS Journal Article
Pioneer factor competing for fate change Journal Article
Polycomb Repressive Complex 2 and H3K27me3 Cooperate with H3K9 Methylation To Maintain Heterochromatin Protein 1α at Chromatin Journal Article
Putting numbers on chromatin and its interacting partners Journal Article
RNA binding by the glucocorticoid receptor attenuates dexamethasone-induced gene activation Journal Article
RNA is essential for PRC2 chromatin occupancy and function in human pluripotent stem cells Journal Article
RNA traffic control of chromatin complexes Journal Article
Reconstitution of nucleosome core particles from recombinant histones and DNA Journal Article
Regulatory sharing between estrogen receptor α bound enhancers Journal Article
Replication fork movement sets chromatin loop size and origin choice in mammalian cells Journal Article
Replication timing maintains the global epigenetic state in human cells Journal Article
Repression of Germline RNAi Pathways in Somatic Cells by Retinoblastoma Pathway Chromatin Complexes Journal Article
Reprogramming: identifying the mechanisms that safeguard cell identity Journal Article
Roles of chromatin factors in C. elegans development. Journal Article
SBOL Visual: A Graphical Language for Genetic Designs Journal Article
Schizosaccharomyces pombe mst2(+) encodes a MYST family histone acetyltransferase that negatively regulates telomere silencing Journal Article
Shaping human telomeres: from shelterin and CST complexes to telomeric chromatin organization Journal Article
Single Cell and Open Chromatin Analysis Reveals Molecular Origin of Epidermal Cells of the Skin Journal Article
Single molecule microscopy to profile the effect of zinc status on transcription factor dynamics Journal Article
Snake venom gene expression is coordinated by novel regulatory architecture and the integration of multiple co-opted vertebrate pathways Journal Article
Spn1 and Its Dynamic Interactions with Spt6, Histones and Nucleosomes Journal Article
Stimulus-specific transcriptional regulation within the p53 network Journal Article
Structural characterization of histone H2A variants. Journal Article
Structural characterization of the histone variant macroH2A Journal Article
Structural determinants for generating centromeric chromatin Journal Article
Structural insights into the interactions of Polycomb Repressive Complex 2 with chromatin Journal Article
Structure and dynamics of nucleosomal DNA Journal Article
Structure of histone-based chromatin in Archaea Journal Article
Structure, function, and activator-induced conformations of the CRSP coactivator Journal Article
Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis Journal Article
TRANSCRIBED AND NON-TRANSCRIBED REGIONS OF TETRAHYMENA RIBOSOMAL GENE CHROMATIN HAVE DIFFERENT ACCESSIBILITIES TO MICROCOCCAL NUCLEASE Journal Article
Targeting of Polycomb Repressive Complex 2 to RNA by Short Repeats of Consecutive Guanines Journal Article
Tax recruitment of CBP/p300, via the KIX domain, reveals a potent requirement for acetyltransferase activity that is chromatin dependent and histone tail independent Journal Article
The Caenorhabditis elegans Ortholog of TDP-43 Regulates the Chromatin Localization of the Heterochromatin Protein 1 Homolog HPL-2 Journal Article
The Cac2 subunit is essential for productive histone binding and nucleosome assembly in CAF-1 Journal Article
The Human CDK8 Subcomplex Is a Histone Kinase That Requires Med12 for Activity and Can Function Independently of Mediator Journal Article
The MUC5B-associated variant rs35705950 resides within an enhancer subject to lineage- and disease-dependent epigenetic remodeling Journal Article
The Mediator complex and transcription regulation Journal Article
The Mediator complex as a master regulator of transcription by RNA polymerase II Journal Article
The Noncoding RNA Revolution-Trashing Old Rules to Forge New Ones Journal Article
The core histone n-terminal tail domains function independently and additively during salt-dependent oligomerization of nucleosomal arrays Journal Article
The effect of H3K79 dimethylation and H4K20 trimethylation on nucleosome and chromatin structure Journal Article
The essential histone variant H2A.Z regulates the equilibrium between different chromatin conformational states Journal Article
The histone chaperone CAF-1 safeguards somatic cell identity Journal Article
The human CDK8 subcomplex is a molecular switch that controls Mediator coactivator function Journal Article
The nucleosomal surface as a docking station for Kaposi's sarcoma herpesvirus LANA Journal Article
The recruitment of chromatin modifiers by long noncoding RNAs: lessons from PRC2 Journal Article
The regulation of mammalian mRNA transcription by lncRNAs: recent discoveries and current concepts Journal Article
The right place at the right time: chaperoning core histone variants Journal Article
The tail does not always wag the dog Journal Article
Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre Journal Article
Trans- and cis-acting effects of Firre on epigenetic features of the inactive X chromosome Journal Article
Transcriptional and Epigenetic Dynamics during Specification of Human Embryonic Stem Cells Journal Article
Transcriptional regulation: It takes a village Journal Article
Widespread RNA binding by chromatin-associated proteins Journal Article
lincRNAs act in the circuitry controlling pluripotency and differentiation Journal Article
lncRNAs: Linking RNA to Chromatin Journal Article
p300-mediated tax transactivation from recombinant chromatin: Histone tail deletion mimics coactivator function Journal Article
p53 regulates enhancer accessibility and activity in response to DNA damage Journal Article
ΔNp63α utilizes multiple mechanisms to repress transcription in squamous cell carcinoma cells Journal Article

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