Biochemical Phenomena - Sequence Homology, Amino Acid
PubMed MeSh Term
Overview
subject area of
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Caenorhabditis elegans caspase homolog CSP-2 inhibits CED-3 autoactivation and apoptosis in germ cells Journal Article
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Euplotes telomerase contains an La motif protein produced by apparent translational frameshifting Journal Article
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fzr-1 and lin-35/Rb function redundantly to control cell proliferation in C-elegans as revealed by a nonbiased synthetic screen Journal Article
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A Caenorhabditis elegans homologue of hunchback is required for late stages of development but not early embryonic patterning Journal Article
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A DNA polymerase III holoenzyme-like subassembly from an extreme thermophilic eubacterium. Journal Article
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A PP2A regulatory subunit positively regulates Ras-mediated signaling during Caenorhabditis elegans vulval induction Journal Article
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A gain-of-function allele of cbp-1, the Caenorhabditis elegans ortholog of the mammalian CBP/p300 gene, causes an increase in histone acetyltransferase activity and antagonism of activated Ras Journal Article
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A hypomorphic allele reveals an important role of inturned in mouse skeletal development Journal Article
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A negatively charged amino acid in Skp2 is required for Skp2-Cks1 interaction and ubiquitination of p27(Kip1) Journal Article
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A novel family of C. elegans snRNPs contains proteins associated with trans-splicing Journal Article
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A role for a rat homolog of staufen in the transport of RNA to neuronal dendrites Journal Article
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A three-domain structure for the delta subunit of the DNA polymerase III holoenzyme delta domain III binds delta' and assembles into the DnaX complex. Journal Article
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A unified nomenclature for protein subunits of Mediator complexes linking transcriptional regulators to RNA polymerase II Journal Article
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Allele-Specific Suppressors of lin-1(R175Opal) Identify Functions of MOC-3 and DPH-3 in tRNA Modification Complexes in Caenorhabditis elegans Journal Article
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Amphioxus and lamprey AP-2 genes: implications for neural crest evolution and migration patterns Journal Article
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Amyloid fibril formation propensity is inherent into the hexapeptide tandemly repeating sequence of the central domain of silkmoth chorion proteins of the A-family Journal Article
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An Intrinsically Disordered Region of the DNA Repair Protein Nbs1 Is a Species-Specific Barrier to Herpes Simplex Virus 1 in Primates Journal Article
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Analysis of heterodimer formation by Xklp3A/B, a newly cloned kinesin-II from Xenopus laevis Journal Article
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Ancient and Recent Adaptive Evolution of Primate Non-Homologous End Joining Genes Journal Article
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Arg304 of human DNA primase is a key contributor to catalysis and NTP binding: Primase and the family X polymerases share significant sequence homology Journal Article
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Biotin tagging deletion analysis of domain limits involved in protein-macromolecular interactions. Mapping the tau binding domain of the DNA polymerase III alpha subunit. Journal Article
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C-ELEGANS LIN-45 RAF GENE PARTICIPATES IN LET-60 RAS-STIMULATED VULVAR DIFFERENTIATION Journal Article
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COG-2, a Sox domain protein necessary for establishing a functional vulval-uterine connection in Caenorhabditis elegans Journal Article
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CRN-1, a Caenorhabditis elegans FEN-1 homologue, cooperates with CPS-6/EndoG to promote apoptotic DNA degradation Journal Article
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Caenorhabditis elegans SUR-5, a novel but conserved protein, negatively regulates LET-60 Ras activity during vulval induction Journal Article
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Characterization of the X-linked murine centrin Cetn2 gene Journal Article
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Chemotaxis receptors and signaling Journal Article
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Cloning and biochemical characterization of Bacillus subtilis YxiN, a DEAD protein specifically activated by 23S rRNA: delineation of a novel sub-family of bacterial DEAD proteins Journal Article
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Cloning of Drosophila MCM homologs and analysis of their requirement during embryogenesis. Journal Article
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Comparative Hydrogen-Deuterium Exchange for a Mesophilic vs Thermophilic Dihydrofolate Reductase at 25 degrees C: Identification of a Single Active Site Region with Enhanced Flexibility in the Mesophilic Protein Journal Article
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Comparative sequence analysis of the complete human sarcomeric myosin heavy chain family: Implications for functional diversity Journal Article
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Control of sex-specific apoptosis in C-elegans by the BarH homeodomain protein CEH-30 and the transcriptional repressor UNC-37/Groucho Journal Article
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Crystal structure and mechanism of the Escherichia coli ArnA (PmrI) transformylase domain. An enzyme for lipid A modification with 4-amino-4-deoxy-L-arabinose and polymyxin resistance. Journal Article
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Cytochrome c oxidase: Chemistry of a molecular machine Book
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Demonstration of the in vivo interaction of key cell death regulators by structure-based design of second-site suppressors Journal Article
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Dengue viruses cleave STING in humans but not in nonhuman primates, their presumed natural reservoir Journal Article
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Drosophila TFIIA-L is processed into two subunits that are associated with the TBP/TAF complex. Journal Article
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Electrostatic interactions in the reconstitution of an SH2 domain from constituent peptide fragments Journal Article
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Evidence for increased local flexibility in psychrophilic alcohol dehydrogenase relative to its thermophilic homologue Journal Article
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Evidence for monomeric actin function in INO80 chromatin remodeling Journal Article
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Evidence that pcpA encodes 2,6-dichlorohydroquinone dioxygenase, the ring cleavage enzyme required for pentachlorophenol degradation in Sphingomonas chlorophenolica strain ATCC 39723 Journal Article
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Evolutionary rate in the protein interaction network Journal Article
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Expression of a RecQ helicase homolog affects progression through crisis in fission yeast lacking telomerase Journal Article
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FURTHER COMPARISON OF UBIQUINOL AND CYTOCHROME-C TERMINAL OXIDASES Journal Article
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Functional Authentication of a Novel Gastropod Gonadotropin-Releasing Hormone Receptor Reveals Unusual Features and Evolutionary Insight Journal Article
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Functional genomic analysis of apoptotic DNA degradation in C-elegans Journal Article
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Genomic and Functional Analyses of Rhodococcus equi Phages ReqiPepy6, ReqiPoco6, ReqiPine5, and ReqiDocB7 Journal Article
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Genomic structure and functional control of the Dlx3-7 bigene cluster Journal Article
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Gonadotropin-releasing hormone in invertebrates: Structure, function, and evolution Journal Article
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Histone chaperone specificity in Rtt109 activation Journal Article
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Human ACAP2 is a homolog of C. elegans CNT-1 that promotes apoptosis in cancer cells Journal Article
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Human DNA polymerase alpha uses a combination of positive and negative selectivity to polymerize purine dNTPs with high fidelity Journal Article
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IDENTIFICATION OF A CYSTEINE-RICH RECEPTOR FOR FIBROBLAST GROWTH-FACTORS Journal Article
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Intermolecular tuning of calmodulin by target peptides and proteins: Differential effects on Ca2+ binding and implications for kinase activation Journal Article
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Intracellular Vesicle Fusion Requires a Membrane-Destabilizing Peptide Located at the Juxtamembrane Region of the v-SNARE Journal Article
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Isolation of Intrinsically Active (MEK-independent) Variants of the ERK Family of Mitogen-activated Protein (MAP) Kinases Journal Article
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Isolation, sequencing and overexpression of the gene encoding the theta subunit of DNA polymerase III holoenzyme. Journal Article
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Low Variation in the Polymorphic Clock Gene Poly-Q Region Despite Population Genetic Structure across Barn Swallow (Hirundo rustica) Populations Journal Article
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MEK-2, A CAENORHABDITIS-ELEGANS MAP KINASE KINASE, FUNCTIONS IN RAS-MEDIATED VULVAR INDUCTION AND OTHER DEVELOPMENTAL EVENTS Journal Article
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Mammalian tumor susceptibility gene 101 (TSG101) and the yeast homologue, Vps23p, both function in late endosomal trafficking Journal Article
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Mass instability in isolated recombinant FixL heme domains of Bradyrhizobium japonicum Journal Article
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Mcm10 and the MCM2-7 complex interact to initiate DNA synthesis and to release replication factors from origins Journal Article
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Mechanism and evolution of DNA primases Journal Article
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Microbial composition of near-boiling silica-depositing thermal springs throughout Yellowstone National Park Journal Article
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Modulation of KSR activity in Caenorhabditis elegans by Zn ions, PAR-1 kinase and PP2A phosphatase Journal Article
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Molecular cloning and expression of mouse procalcitonin. Journal Article
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Molecular cloning and expression of the 32-kDa subunit of human TFIID reveals interactions with VP16 and TFIIB that mediate transcriptional activation. Journal Article
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New developments in the production and use of stereoselective antibodies Conference Proceeding
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Paralogy and orthology of tyrosine kinases that can extend the life span of Caenorhabditis elegans Journal Article
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Peripheral nervous system defects in a mouse model for peroxisomal biogenesis disorders Journal Article
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Phenotypic analysis of separation-of-function alleles of MEI-41, Drosophila ATM/ATR Journal Article
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Phosphoinositide signaling and the regulation of membrane trafficking in yeast Journal Article
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Phosphorylation regulates human OCT4 Journal Article
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Quantitative assessment of EF-1α•GTP binding to aminoacyl-tRNAs, aminoacyl-viral RNA, and tRNA shows close correspondence to the RNA binding properties of EF-Tu Journal Article
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REGULATION OF THE MEC-3-GENE BY THE C-ELEGANS HOMEOPROTEINS UNC-86 AND MEC-3 Journal Article
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Regulation of telomere length and function by a Myb-domain protein in fission yeast Journal Article
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Roles for FGF in lamprey pharyngeal pouch formation and skeletogenesis highlight ancestral functions in the vertebrate head Journal Article
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SOLUTION STRUCTURE OF BOVINE NEUTROPHIL BETA-DEFENSIN-12 - THE PEPTIDE FOLD OF THE BETA-DEFENSINS IS IDENTICAL TO THAT OF THE CLASSICAL DEFENSINS Journal Article
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SOX7 is an immediate-early target of VegT and regulates Nodal-related gene expression in Xenopus Journal Article
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STRUCTURE AND DYNAMICS OF THE NEUTROPHIL DEFENSINS NP-2, NP-5, AND HNP-1 - NMR-STUDIES OF AMIDE HYDROGEN-EXCHANGE KINETICS Journal Article
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SUMO-1 modification of MEF2A regulates its transcriptional activity Journal Article
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SUPPRESSION OF ACTIVATED LET-60 RAS PROTEIN DEFINES A ROLE OF CAENORHABDITIS-ELEGANS SUR-1 MAP KINASE IN VULVAR DIFFERENTIATION Journal Article
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SUR-8, a conserved Ras-binding protein with leucine-rich repeats, positively regulates Ras-mediated signaling in C-elegans Journal Article
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Sequestration of a highly reactive intermediate in an evolving pathway for degradation of pentachlorophenol Journal Article
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Structural Basis of Selective Ubiquitination of TRF1 by SCFFbx4 Journal Article
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Structural basis of the phosphorylation-independent recognition of cydin D1 by the SCFFBXO31 ubiquitin ligase Journal Article
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Structural characterization of histone H2A variants. Journal Article
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Structural, biochemical, and functional analyses of CED-9 recognition by the proapoptotic proteins EGL-1 and CED-4 Journal Article
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Structure of Mediator of RhoA-Dependent Invasion (MRDI) Explains Its Dual Function as a Metabolic Enzyme and a Mediator of Cell Invasion Journal Article
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Structure of synaptophysin: A hexameric MARVEL-domain channel protein Journal Article
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Structure of the universal stress protein of Haemophilus influenzae. Journal Article
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Structure of the yeast nucleosome core particle reveals fundamental changes in internucleosome interactions Journal Article
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Structures of the Major Capsid Proteins of the Human Karolinska Institutet and Washington University Polyomaviruses Journal Article
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Substrate recognition by the AAA plus chaperone ClpB Journal Article
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Sunflower domestication alleles support single domestication center in eastern North America Journal Article
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Telomerase reverse transcriptase genes identified in Tetrahymena thermophila and Oxytricha trifallax Journal Article
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The Arabidopsis AAA ATPase SKD1 is involved in multivesicular endosome function and interacts with its positive regulator LYST-INTERACTING PROTEIN5 Journal Article
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The C-elegans evl-20 gene is a homolog of the small GTPase ARL2 and regulates cytoskeleton dynamics during cytokinesis and morphogenesis Journal Article
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The Dlx gene complement of the leopard shark, Triakis semifasciata, resembles that of mammals: Implications for genomic and morphological evolution of jawed vertebrates Journal Article
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The NH2-terminal php domain of the alpha subunit of the Escherichia coli replicase binds the epsilon proofreading subunit. Journal Article
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The Orphan Protein Bis-gamma-glutamylcystine Reductase Joins the Pyridine Nucleotide Disulfide Reductase Family Journal Article
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The RNA-binding protein Tsunagi interacts with Mago Nashi to establish polarity and localize oskar mRNA during Drosophila oogenesis Journal Article
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The Silkmoth Eggshell as a Natural Amyloid Shield for the Safe Development of Insect Oocyte and Embryo: Insights From Studies of Silkmoth Chorion Protein Peptide-Analogues of the B Family Journal Article
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The crystal structure of a hyperthermophilic archaeal TATA-box binding protein. Journal Article
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The mitogen-activated protein kinase activator. Journal Article
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The p38β Mitogen-activated Protein Kinase Possesses an Intrinsic Autophosphorylation Activity, Generated by a Short Region Composed of the α-G Helix and MAPK Insert Journal Article
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The p58 subunit of human DNA primase is important for primer initiation, elongation, and counting Journal Article
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The structure of nucleosome assembly protein 1 Journal Article
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Thermodynamic modulation of light chain amyloid fibril formation Journal Article
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Towards an understanding of the poliovirus replication complex: The solution structure of the soluble domain of the poliovirus 3A protein Journal Article
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Transmembrane Peptides Used to Investigate the Homo-Oligomeric Interface and Binding Hotspot of Latent Membrane Protein 1 Journal Article
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Ubiquitination of p27(Kip1) requires physical interaction with cyclin E and probable phosphate recognition by SKP2 Journal Article
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VIMENTINS TAIL INTERACTS WITH ACTIN-CONTAINING STRUCTURES IN-VIVO Journal Article
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X-ray structure and microtubule interaction of the motor domain of neurospora crassa NcKin3, a kinesin with unusual processivity Journal Article
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YxiN is a modular protein combining a DEx(D/H) core and a specific RNA-binding domain. Journal Article
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lin-35/Rb and ubc-18, an E2 ubiquitin-conjugating enzyme, function redundantly to control pharyngeal morphogenesis in C-elegans Journal Article
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mago nashi mediates the posterior follicle cell-to-oocyte signal to organize axis formation in Drosophila Journal Article
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opl:: a zinc finger protein that regulates neural determination and patterning in Xenopus Journal Article
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