selected publications
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book
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journal article
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Nonadaptive explanations for signatures of partial selective sweeps in Drosophila.
Molecular Biology and Evolution.
1025-1042.
2008
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The application of statistical physics to evolutionary biology.
Proceedings of the National Academy of Sciences of USA.
9541-9546.
2005
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Functional genomic analysis of the rates of protein evolution.
Proceedings of the National Academy of Sciences of USA.
5483-5488.
2005
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Adjusting for selection on synonymous sites in estimates of evolutionary distance.
Molecular Biology and Evolution.
174-177.
2005
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Coevolution of gene expression among interacting proteins.
Proceedings of the National Academy of Sciences of USA.
9033-9038.
2004
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Noise minimization in eukaryotic gene expression.
PLoS Biology.
834-838.
2004
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Evolutionary rate depends on number of protein-protein interactions independently of gene expression level.
BMC Evolutionary Biology.
2004
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Functional and evolutionary genomics of Mycobacterium tuberculosis:: Insights from genomic deletions in 100 strains.
Proceedings of the National Academy of Sciences of USA.
4865-4870.
2004
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Stable association between strains of Mycobacterium tuberculosis and their human host populations.
Proceedings of the National Academy of Sciences of USA.
4871-4876.
2004
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Detecting putative orthologs.
Bioinformatics.
1710-1711.
2003
- On the use of star-shaped genealogies in inference of coalescence times. Genetics: a periodical record of investigations bearing on heredity and variation. 1677-1682. 2003
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Size matters: Non-LTR retrotransposable elements and ectopic recombination in Drosophila.
Molecular Biology and Evolution.
880-892.
2003
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Rate of evolution and gene dispensability - Reply.
Nature.
497-498.
2003
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A simple dependence between protein evolution rate and the number of protein-protein interactions.
BMC Evolutionary Biology.
2003
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Evolutionary rate in the protein interaction network.
Science.
750-752.
2002
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Ligand-mediated protection against phage lysis as a positive selection strategy for the enrichment of epitopes displayed on the surface of E-coli cells.
Biological Chemistry: official scientific journal of the GBM.
1669-1677.
2001
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Protein dispensability and rate of evolution.
Nature.
1046-1049.
2001
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Distributed problem solving in social insects.
Annals of Mathematics and Artificial Intelligence.
199-221.
2001
- A Book Like No Other (review of Genome: The Autobiography of a Species in 23 Chapters). The American scholar. 145-147. 2000
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Nonadaptive explanations for signatures of partial selective sweeps in Drosophila.
Molecular Biology and Evolution.
1025-1042.
2008